Publications
Proof-of-concept using Ka/Ks ratios and our definition of core residue
CRK: an evolutionary approach for distinguishing biologically relevant interfaces from crystal contacts
Martin A. Scharer, Markus G. Grutter and Guido Capitani
Proteins: Structure, Function, and Bioinformatics, 2010, 78:2707-2713
DOI: 10.1002/prot.22787
Main paper describing the EPPIC method and the DCxtal and DCbio interface datasets
Protein interface classification by evolutionary analysis
Jose M Duarte, Adam Srebniak, Martin A Scharer and Guido Capitani
BMC Bioinformatics, 2012, 13:334
Performance of EPPIC on membrane protein interfaces and TMPBio interface dataset
An analysis of oligomerization interfaces in transmembrane proteins
Jose M Duarte, Nikhil Biyani, Kumaran Baskaran and Guido Capitani
BMC Structural Biology, 2013, 13:21
PDB-wide assessment
A PDB-wide, evolution-based assessment of protein–protein interfaces
Kumaran Baskaran, Jose M Duarte, Nikhil Biyani, Spencer Bliven and Guido Capitani
BMC Structural Biology, 2014, 14:22
DOI: 10.1186/s12900-014-0022-0
Assembly prediction, version 3
Automated evaluation of quaternary structures from protein crystals
Spencer Bliven, Aleix Lafita, Althea Parker, Guido Capitani, Jose M. Duarte
PLoS Computational Biology, 2018, 14(4): e1006104
DOI: 10.1371/journal.pcbi.1006104
Please cite this paper if you use any service from this web server